Codes for vectors and associated cloning sites

Most clones are defined by their initial letter(s), according to the table below.
The principal exceptions are:
1) Laboratory designations (2 letters followed by a number)
2) MIT clones, which have 1, 2, or 3 identical letters, followed by any letter from A to H, followed by a number from 1 to 12. Vector is pHC79.

Method of selection:
pJB8 and pHC79 ampicillin
Lorist kanamycin
pYAC4 yeast ura-medium

G pfosl chloramphenicol
Note that in most cases Lorist clones are the easier cosmids to grow; because, unlike ampicillin, kanamycin is not destroyed by the cells.

Clone name:		Vector:
A			Lambda 2001 Sau3AI partial
ZL			Lambda 2001 Sau3AI partial probed
YSL			Lambda 2001 YAC subclones, Sau3AI partial
B			pJB8 serial Sau3AI partial
C			pJB8 gridded in microtiter plates Sau3AI partial
D			pJB8 gridded on filters Sau3AI partial
E			pJB8 EcoK minus Sau3AI partial
R			pJB8 RI partial
M			pJB8 MboI partial
ZC			pJB8 probed
K			Lorist B Sau3AI partial
T			Lorist 2 Sau3AI partial
W			Lorist 6 NotI plus Sau3AI partial
F			Lorist 6 Sau3AI partial
ZK	15 -   56	Lorist 6 Sau3AI partial probed
	57 - 130	Lorist 2 Sau3AI partial probed
	131 - 164	Lorist 6 Sau3AI partial probed
	165 - 177	Lorist 2 Sau3AI partial probed
	178 - 192	Lorist 6 Sau3AI partial probed
	193 - 344	Lorist 2 Sau3AI partial probed
	345 - 354	Lorist 6 Sau3AI partial probed
	355 - 514	Lorist 2 Sau3AI partial probed
	515 - 552	Lorist 6 Sau3AI partial probed
	553 - 596	Lorist 2 Sau3AI partial probed
	597 - 616	Lorist ? Sau3AI partial probed
	617 - 626	Lorist 2 Sau3AI partial probed
	627 - 692	Lorist 6 Sau3AI partial probed
	693 - 756	Lorist 2 Sau3AI partial probed
	757 onwards	Lorist 6 Sau3AI partial probed
Y			pYAC4 RI partial
Yeast:
PEL			pel61 SmaI
9...			pphc79 SmaI

Additional information
---------- -----------
Name:	Vector:		Cell:	Selection:	Cloning site:		Organism:
H_DJ	pcypac2		DH10B	kan		Sau3A in BamH1 (GATC)	Human(RPCI1,3-5)
G	pfos1		XL1	chlor		Sau3A in BamH1 (GATC)	C. briggsae
H	pfos1		XL1	chlor		Sau3A in BamH1 (GATC)	C. elegans
MM	lorist6		XL1	kan		Sau3A in BamH1 (GATC)	C. briggsae
H_GS	pbelo		DH10B	chlor		HindIII (AAGCTT)	Human
H_RG	pbelo		DH10B	chlor		HindIII (AAGCTT)	Human
H_LUCA	pwe15		?	kan		EcoRI (GAATTC)		Human (III)
H_P1	p1		?	kan		Sau3A in BamH1 (GATC)	Human (III)
H_U	lawrist16	?	kan		Sau3A in BamH1 (GATC)	Human (X)
H_LL	lawrist16	?	kan		Sau3A in BamH1 (GATC)	Human (7)
A_TM	pbelo		?	chlor		HindIII (AAGCTT)	Arabidopsis
A_IG	pbelo		?	kan		EcoRI (GAATTC)		Arabidopsis
H_NH	pBACe3.6	DH10B	chlor		EcoRI (GAATTC)		human (RPCI11)
H_DA	pPAC4		DH10B	kan		MboI in BamHI (GATC)	human (RPCI6)
CB	pBAC3.6		DH10B	chlor		EcoRI (GAATTC)		C. briggsae